PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY51868.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 321aa    MW: 36507.3 Da    PI: 5.5149
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY51868.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64.1e-17897198
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                ffkv       +s+rl +p  f+ ++ +++ ++ +++l +  g+ W v +    +++++++ +GW++Fvk+n L++ D++v+k+dg+  f  +vk+  
  GAY51868.1  8 FFKVY--LPEKSSNRLHIPDAFI-AY-LSPLKPEKVMLINHIGEYWHVDV--AYCDKGVFFLDGWQKFVKDNSLETADILVLKYDGDCWF--NVKIMG 97
                77777..66778899********.67.33456678***************..77777888889***********************9999..777765 PP
2B334.83e-112223051297
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                 +++ l +p + +++ g+k    k++t+ de+g s+  +l ++k +++    kGW+ F++a++Lk  D+++ +++ +r ++ + +v+++
  GAY51868.1 222 RKNYLHVPSHVLKDLGLK--LAKKITILDERGYSFHGQLDIWKDGRQG--IKGWSAFCRAKKLKKDDICICEFThSRkMQNTIKVHIV 305
                 567899999999999999..7779***************888888773..37****************99775533348888888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MAKCIPGFFK VYLPEKSSNR LHIPDAFIAY LSPLKPEKVM LINHIGEYWH VDVAYCDKGV  60
FFLDGWQKFV KDNSLETADI LVLKYDGDCW FNVKIMGKSG IEKTESYKED LWVEDEEEET  120
EEEEKGGEEA EEDCKDDSVF EVGDNDSAAD KDYIEEEDDD DEMTAITSCR GRINIGKSKK  180
RAVAKAGGSK AVYDINLLEV DVGDYGLYPN PYFVSKAWAG TRKNYLHVPS HVLKDLGLKL  240
AKKITILDER GYSFHGQLDI WKDGRQGIKG WSAFCRAKKL KKDDICICEF THSRKMQNTI  300
KVHIVQGVGS QSKAKRSRSK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.16e-21B3 family protein