PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52134.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 294aa MW: 33585.2 Da PI: 7.8545

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52134.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	140.6	9.7e-44	7	125	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeelv++yL++k+ ++++ + +i+e+d+yk++PwdLp + +ekewyfF++rd+ky++g+r+nr g dk++ + + GAY52134.1 7 LPPGFRFHPTDEELVMHYLCRKCLSQPIAV-PIIAEIDLYKFDPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRRR------GAGADKPIGQ--PKP 96 79************************99.88***********65556799****************74......4789999987..778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy g+apkgekt+W+mheyrl GAY52134.1 97 VGIKKALVFYAGKAPKGEKTNWIMHEYRL 125 9************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MTAELQLPPG FRFHPTDEEL VMHYLCRKCL SQPIAVPIIA EIDLYKFDPW DLPDLALYGE 60 KEWYFFTPRD RKYPNGSRPN RRRGAGADKP IGQPKPVGIK KALVFYAGKA PKGEKTNWIM 120 HEYRLADVDR SARKKNSLRL DDWVLCRIYN KKGSIEKKQQ VTNRRPNFTE TEAEEKKPVV 180 MPSGMDKSTS GGALIPNPAS TVTGTGTVND YMYFDTSDSV PKLNTDSSCS EHVVSPEFTC 240 EVQSEPKMQP WENTLGFPYN YLDSTMDISF NSQFQGNNQL SPLQDMFMYL PKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-135	NAC family protein