PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52401.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 206aa    MW: 23321.7 Da    PI: 9.7598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-17127176255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r++   grW+AeIrdp+    r  r++lg+f+t e Aa+a+++a+ +++g
  GAY52401.1 127 KYRGIRQRQ-CGRWAAEIRDPR----RaVRVWLGTFDTDEAAARAYDRAAIEFRG 176
                 8*****999.7*********82....48************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MENSSRSSQL KALVNREEEH NVMVSTLKHV ITGHIIAIDE HQAATLSFSS NGKGMEENKQ  60
VSCTMAKLIL PDAVTCQVCE INGCLGCNLF PPSEEYCTTP TPGTSNENEV IMKNEKKKKK  120
KKKKKNKYRG IRQRQCGRWA AEIRDPRRAV RVWLGTFDTD EAAARAYDRA AIEFRGLKAK  180
LNFPLSDYIA KNYSEPEQRS KFKPPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1116122KKKKKKK
2116124KKKKKKKKK
3116125KKKKKKKKKK
4117123KKKKKKK
5117125KKKKKKKKK
6118124KKKKKKK
7119125KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-30ERF family protein