PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52411.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 394aa MW: 43943 Da PI: 6.9049

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.7	1.8e-17	81	171	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 f k +++s+v + ++ lp f+++h + +++ ++ledesg +++ k+ +k++ l++GW++F a++L egD++vF+l+ +l+v ++r+ GAY52411.1 81 FAKSMVRSHVASCFWMGLPGYFCKSHLPD--KDTSVVLEDESGIQYTAKYFAEKTG----LSAGWRQFSTAHNLVEGDVLVFQLIA--PLKLKVYIIRA 171 889*********************544..4567***********555555....*********************997..77789999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MKPSKKKGKI ILKLKKSPPD TSVTSVPGTV EPDSRGGGKT KSSKKNKDVV DGKCSPVEPK 60 SPAMIRAEEV QSNLEPQFPS FAKSMVRSHV ASCFWMGLPG YFCKSHLPDK DTSVVLEDES 120 GIQYTAKYFA EKTGLSAGWR QFSTAHNLVE GDVLVFQLIA PLKLKVYIIR ANDFTEGRSA 180 SNLGQPAEQS ENDSEEVGSE VLEGFKISTP PVQFKDVTSL DNFNILVDGL VVDSELPEDI 240 RCNYYKLCCS QNAFLHENLA QGINFKLIVG TISEIVNIAD ALRACKFTTS RDEFAMWDKT 300 LKAFELLGMS VGFLRARLRR LQRLAFESEG AEDTRRYIEA KAQQSQTQDE IRNIEARLVE 360 LKGAWQRFDA EISSLKSSAE SYELKFREVA NAPW

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MKPSKKKGKI ILKLKKSPPD TSVTSVPGTV EPDSRGGGKT KSSKKNKDVV DGKCSPVEPK  60
SPAMIRAEEV QSNLEPQFPS FAKSMVRSHV ASCFWMGLPG YFCKSHLPDK DTSVVLEDES  120
GIQYTAKYFA EKTGLSAGWR QFSTAHNLVE GDVLVFQLIA PLKLKVYIIR ANDFTEGRSA  180
SNLGQPAEQS ENDSEEVGSE VLEGFKISTP PVQFKDVTSL DNFNILVDGL VVDSELPEDI  240
RCNYYKLCCS QNAFLHENLA QGINFKLIVG TISEIVNIAD ALRACKFTTS RDEFAMWDKT  300
LKAFELLGMS VGFLRARLRR LQRLAFESEG AEDTRRYIEA KAQQSQTQDE IRNIEARLVE  360
LKGAWQRFDA EISSLKSSAE SYELKFREVA NAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-36	B3 family protein