PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52566.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 224aa    MW: 25323.2 Da    PI: 5.4614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.8e-1884134255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g
  GAY52566.1  84 SYRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFSMRG 134
                 69*******.**********422...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDSLFFHSPN SISSSESSFG SPESFPFYNN YLPFNENDSE EMLLYGLIAE ATPEATSEAL  60
VSSKRIKEEE VSSTTEENPT KEKSYRGVRR RPWGKFAAEI RDSTRHGIRV WLGTFDSAEA  120
AALAYDQAAF SMRGSSAILN FPVERVQESL KDMKCNTEEG CSPVVALKRK HSMRRKMVTN  180
NKKHKERDNL RIENFVVLED LGADYLEELL SSSESNTTTT ARPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-65ERF family protein