PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52707.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ZF-HD
Protein Properties Length: 376aa    MW: 40881.4 Da    PI: 7.5723
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer111.64e-3568125359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+YkeClkNhAas+Ggha+DGCgEfmps++++ +++++lkCaACgCHRnFHRre+++
   GAY52707.1  68 VVTYKECLKNHAASIGGHALDGCGEFMPSPTATpSDPTSLKCAACGCHRNFHRREPDQ 125
                  589******************************9*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MDITPTNNNT LNTNTNSKSP ETDTTDNHQT GATRIHSAKP LTFTNGVLKR HQPQHHHHHH  60
HHHHHPIVVT YKECLKNHAA SIGGHALDGC GEFMPSPTAT PSDPTSLKCA ACGCHRNFHR  120
REPDQDHHLP HVPTTATTAT IEYQPHHRHH PPPPVTQPPS RRSPSSASPP PISSSYYPSA  180
PHMLLALSGN LQQSSAAAAV PQENHHISNN HHHNNNNIMM SNSGGSSGGR KRFRTKFSQS  240
QKEKMFEFAE RVGWKMQKRD DDLVHEFCNE VGVDRTVLKV WMHNNKSTFA KRDLNGAGGS  300
GSGSAGGGIG RINLDDDNTG NDNINNSKSG DGDDQDEEEG INNNNNGVRN LNHQFGSATE  360
SAAHVANANG GSSSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.13e-66ZF-HD family protein