PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52738.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 348aa MW: 39354.1 Da PI: 6.6024

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.9	7.9e-57	12	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL++kv + +++ ++i evd++k+ePwdLp+++k +ekewyfF+ rd+ky+tg r+nrat++gyWkatgkdke+++ ++l GAY52738.1 12 LPPGFRFHPTDEELITHYLTPKVFDGCFSA-RAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYK-AKAL 108 79***********************999.89***********99999**************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrapkg+kt+Wvmheyrle GAY52738.1 109 VGMKKTLVFYKGRAPKGQKTNWVMHEYRLE 138 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MEKYDDQEQI ELPPGFRFHP TDEELITHYL TPKVFDGCFS ARAIGEVDLN KCEPWDLPRR 60 AKMGEKEWYF FCVRDRKYPT GLRTNRATEA GYWKATGKDK EIYKAKALVG MKKTLVFYKG 120 RAPKGQKTNW VMHEYRLEGK YSAYDHPKTA KNEWVICRVF QKSGGGKKTH IQGMVKLGSF 180 GNGIGSSALP PLMDSSPYNS ETRTTINETS HVTCFSDALE DQKAQEDMID SFNNSLLASS 240 SSSNPHSEIS PASIFFSKSS FSNSLYADQI LPRIANMQYP DSFLMQDQSI LKMLLENHGP 300 STKKNSKAEF SQDESVVSNH EFIQGSFDDQ EDPSSSAGPV ALDCLWNY

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MEKYDDQEQI ELPPGFRFHP TDEELITHYL TPKVFDGCFS ARAIGEVDLN KCEPWDLPRR  60
AKMGEKEWYF FCVRDRKYPT GLRTNRATEA GYWKATGKDK EIYKAKALVG MKKTLVFYKG  120
RAPKGQKTNW VMHEYRLEGK YSAYDHPKTA KNEWVICRVF QKSGGGKKTH IQGMVKLGSF  180
GNGIGSSALP PLMDSSPYNS ETRTTINETS HVTCFSDALE DQKAQEDMID SFNNSLLASS  240
SSSNPHSEIS PASIFFSKSS FSNSLYADQI LPRIANMQYP DSFLMQDQSI LKMLLENHGP  300
STKKNSKAEF SQDESVVSNH EFIQGSFDDQ EDPSSSAGPV ALDCLWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-132	NAC family protein