PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY52801.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 430aa    MW: 48825.6 Da    PI: 4.265
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY52801.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-07270318247
                      SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+eE+ ++ ++v  ++       W+  +  ++  Rt ++++s+++++
       GAY52801.1 270 KNWTKEEENKFHEVVSSYPVSmgknFWDHLSLVFP-SRTKNELVSYYFNV 318
                      68***************98878888**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MIHKRPFLDE DCFEFPCKHP KQWECTNYLA PMVHMSPPAD GHQKPQTSDG DGEQNINRCR  60
DQGRFLFGPV AEVSNGTEKE FEIGSDCISP LFWANGLFAE GDANSEEVYL SLFPEYFATE  120
HQIRTFLQSD EIYSSHLDHP PVKSVSIGPE YQADVPEWCL QGSKNSLAHL DGSDHQVRLE  180
RLSGSCLVVD DVQGEKLLGT CVVSMPDSAP SANYYSQSLV TRNDCECLDK GSIRCVRQHV  240
MEAREKLRVN LGHKIFEELG FHEMGEEVSK NWTKEEENKF HEVVSSYPVS MGKNFWDHLS  300
LVFPSRTKNE LVSYYFNVFI LQKRAEQNRF DPLNIDSDDD EWQRCDLGAA EEDEESGVEF  360
LSNRGVSAYQ QDDHVENCQD DTEGGYLIDD CKNDANVVHT VATDEEEDGD VDDVPEPHVR  420
DLFSHSSTDT