PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52908.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

SRS

Protein Properties

Length: 230aa MW: 25650.7 Da PI: 8.6155

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	157.8	7.2e-49	13	150	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaa.saaeaaskrkrelkskkqsalsstklssaeskkele 101 g ++CqdCGnqakk+Ca++RCRtCCk rg++C+th+kstW+pa++r +r ++++ ++++ + + +++kr r ++ s+ l+ GAY52908.1 13 GVTRCQDCGNQAKKNCAYMRCRTCCKRRGYECETHIKSTWIPAYRRHQRYHHQHLVPVHEQHlQLQGHSPKRLR----------------ENPSSPGLQ 95 6689******************************************97766655333322022222222222................333444788 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeee..laYqtavsigGhvfkGiLydqGlee 154 + ++P+e+ sea frcv+vss+dd+ + laY+t++s+gGh+fkGiLy+qG e+ GAY52908.1 96 IGNFPAEITSEATFRCVKVSSIDDAIDRttLAYKTSISVGGHIFKGILYYQGCES 150 899*****************6554349*******************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MMMNIRQLGA ELGVTRCQDC GNQAKKNCAY MRCRTCCKRR GYECETHIKS TWIPAYRRHQ 60 RYHHQHLVPV HEQHLQLQGH SPKRLRENPS SPGLQIGNFP AEITSEATFR CVKVSSIDDA 120 IDRTTLAYKT SISVGGHIFK GILYYQGCES NSNNNVGESS SSEPPPPPQH QQQPYYPFTV 180 AALTTTTAAT TTTTTALAAA DETPYSSSFT YPFGSYVSAG TQFFPKYPNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	2e-45	SRS family protein