PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY52920.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 675aa MW: 74113 Da PI: 5.9417

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY52920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.7e-09	420	457	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + GAY52920.1 420 FEHflHPYPKDTDKIMLARQTGLTRSQVSNWFINARVR 457 664459******************************88 PP
2	BELL	132.9	1e-42	282	353	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqelq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+++ag+g+akpYt+lAl++iSrhFrcL+dai++qi GAY52920.1 282 ERQELQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDAICGQI 353 79*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MATYFTSSSN QREGTPMIYL RESLPSSYPE APVLPGNVMM YMNSGSYSDA LAGSSQQQNN 60 CIDIQSVEAS HSTPQQQEMF SNLGGTRIVE HQFNAWRDSR NEMLVMHSMG GSTGILHGGQ 120 NLQGQGLSLS LGTQIPSGIQ MPSIPYRNPS AGFVSFLGSN SSISADNGRN GPSTDEQSRN 180 ADYLPAGTSG GNQDGKGDLS PYGMPSIARA IPSSKYLKAA QQLLDEVVNV RKALRQPDGE 240 KSQSTHEQRM NNSKDGDGGS KDVTSNTQES PSNSPNELSH AERQELQNKL TKLLSMLDEV 300 DRRYKQYYHQ MQIVVSSFDV IAGCGAAKPY TALALQTISR HFRCLRDAIC GQIRATRKSL 360 GEQENSENSK GVGITRLRYV DQQLRQQRAL QHLGMMQQHA WRPQRGLPES SVSILRAWLF 420 EHFLHPYPKD TDKIMLARQT GLTRSQVSNW FINARVRLWK PMVEEMYKEE FADAEMDSNS 480 SSENAAKATR GDLRASEDRE EDLQQSGSST AAERCSTGQL TESKSNRIPD IEMAGASFQN 540 ETSGEAETEY GLLKLREEQR PGVDDCNLFP DAMVPSSGGN DRFMAAAAAY HHMSELGRFG 600 SGSGVSLTLG LQNCEGGSLP MAGATHQSFV AMRDDEMYHA AASSVGTDTV DYDCINNGNR 660 QPRFSSSHLL HDFVA

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MATYFTSSSN QREGTPMIYL RESLPSSYPE APVLPGNVMM YMNSGSYSDA LAGSSQQQNN  60
CIDIQSVEAS HSTPQQQEMF SNLGGTRIVE HQFNAWRDSR NEMLVMHSMG GSTGILHGGQ  120
NLQGQGLSLS LGTQIPSGIQ MPSIPYRNPS AGFVSFLGSN SSISADNGRN GPSTDEQSRN  180
ADYLPAGTSG GNQDGKGDLS PYGMPSIARA IPSSKYLKAA QQLLDEVVNV RKALRQPDGE  240
KSQSTHEQRM NNSKDGDGGS KDVTSNTQES PSNSPNELSH AERQELQNKL TKLLSMLDEV  300
DRRYKQYYHQ MQIVVSSFDV IAGCGAAKPY TALALQTISR HFRCLRDAIC GQIRATRKSL  360
GEQENSENSK GVGITRLRYV DQQLRQQRAL QHLGMMQQHA WRPQRGLPES SVSILRAWLF  420
EHFLHPYPKD TDKIMLARQT GLTRSQVSNW FINARVRLWK PMVEEMYKEE FADAEMDSNS  480
SSENAAKATR GDLRASEDRE EDLQQSGSST AAERCSTGQL TESKSNRIPD IEMAGASFQN  540
ETSGEAETEY GLLKLREEQR PGVDDCNLFP DAMVPSSGGN DRFMAAAAAY HHMSELGRFG  600
SGSGVSLTLG LQNCEGGSLP MAGATHQSFV AMRDDEMYHA AASSVGTDTV DYDCINNGNR  660
QPRFSSSHLL HDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-133	TALE family protein