PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53106.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 589aa MW: 67302.1 Da PI: 6.5196

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53106.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.6	1e-11	118	158	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 W ++E+ ll+++++++G g+W +++++g +++ qc+++++ GAY53106.1 118 WNADEEILLLEGIEMYGFGNWGEVSEHVG-TKSKSQCIDHYN 158 ***************************.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MGRYRAVSHV ADEDHSQNLT NSISIFSRSK RKRTISSLEN VETASTGQPL SEGKGALYHC 60 NYCNKDLSGM VRIKCAMCSD FDLCVECFSV GAQIYPHESN HPYRVMDNLS FPLICPDWNA 120 DEEILLLEGI EMYGFGNWGE VSEHVGTKSK SQCIDHYNAI YMNSPCFPLP DLSHVMGKNR 180 EELLAMAKEH QQVKKELPTV AELALKEDAP FSTRMKPETR KEDTTRQSSS GLTTVEVNSI 240 DPSNGNAFSF KKASNMTQVK ESVKVEVLAE PQSDRSIGEK KLRTSGDERP SMKELSGYNF 300 KRQEFEIEYD NDAEHLLADM EFNKNDTDAE RELKLRVLRI YGKRLDERKR RKDFILERNL 360 LFPDPFERNL SPEEREIYQQ YKVFMRFHSK EDHEELLKSV IEEHRIVKRI QELQEAQAAG 420 CRTSSEAHRF LEQKRKKEAE ENGQRVKESG QAGPSGKVLQ RPNSLKEVEV SPRGVVRGST 480 SLQPFGNDSY STIASSLEDW DISGFVGADL LSETVRTLFL MSYVFMEKRL CGEIKILPAH 540 YLKMLEILSV EIYKGNVSKK SDAHNLFKVE PNKVDRVYDM LVRKGIAQA

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MGRYRAVSHV ADEDHSQNLT NSISIFSRSK RKRTISSLEN VETASTGQPL SEGKGALYHC  60
NYCNKDLSGM VRIKCAMCSD FDLCVECFSV GAQIYPHESN HPYRVMDNLS FPLICPDWNA  120
DEEILLLEGI EMYGFGNWGE VSEHVGTKSK SQCIDHYNAI YMNSPCFPLP DLSHVMGKNR  180
EELLAMAKEH QQVKKELPTV AELALKEDAP FSTRMKPETR KEDTTRQSSS GLTTVEVNSI  240
DPSNGNAFSF KKASNMTQVK ESVKVEVLAE PQSDRSIGEK KLRTSGDERP SMKELSGYNF  300
KRQEFEIEYD NDAEHLLADM EFNKNDTDAE RELKLRVLRI YGKRLDERKR RKDFILERNL  360
LFPDPFERNL SPEEREIYQQ YKVFMRFHSK EDHEELLKSV IEEHRIVKRI QELQEAQAAG  420
CRTSSEAHRF LEQKRKKEAE ENGQRVKESG QAGPSGKVLQ RPNSLKEVEV SPRGVVRGST  480
SLQPFGNDSY STIASSLEDW DISGFVGADL LSETVRTLFL MSYVFMEKRL CGEIKILPAH  540
YLKMLEILSV EIYKGNVSKK SDAHNLFKVE PNKVDRVYDM LVRKGIAQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	348	353	RKRRKD