PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY53253.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 250aa MW: 28247.9 Da PI: 7.4569

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY53253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	136.9	1.3e-42	87	215	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk..dkevlskkg 97 lpp+frF+Ptdeel+v +L++kv+g++l++ ++i+e+d yk+ePw+Lp+k+ ++ ew+fFs+ d+++++ +++nr+t gyW+ g+ dk ++++++ GAY53253.1 87 LPPCFRFSPTDEELLVLFLRRKVAGRRLSI-NFITEIDFYKFEPWELPSKALFGDYEWFFFSPMDRRNPEASEPNRVTGVGYWEDAGSgtDKIITTAGR 184 79**************************.99***********87778999************************776543888888899 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l g+kk Lv+ykg+ap+g kt+W+mheyrl GAY53253.1 185 KLAGIKKALVYYKGNAPNGIKTEWIMHEYRL 215 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MRKYKDKDGN EKAECNHCKK TFDGSSKKGT THLKNHLDRC RANNNKRKGG AAGDENESSS 60 FKTTDLATPI VAVEDNGDVF DHDLISLPPC FRFSPTDEEL LVLFLRRKVA GRRLSINFIT 120 EIDFYKFEPW ELPSKALFGD YEWFFFSPMD RRNPEASEPN RVTGVGYWED AGSGTDKIIT 180 TAGRKLAGIK KALVYYKGNA PNGIKTEWIM HEYRLIEPPP NNDSSKTIGF CEEYLNAGAV 240 VVLFIFSSPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	8e-61	NAC family protein