PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53277.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 151aa    MW: 17257.6 Da    PI: 11.663
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-204192255
         AP2  2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr+++ + +++AeIrd ++ ng  +r++lg+++t+e+Aa a+++a+ +l+g
  GAY53277.1 41 LFRGVRRRP-WRKFAAEIRDRKNkNG--ARVWLGTYDTPEDAALAYDRAAFRLHG 92
                69*******.**********555476..**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MGINLPFLIP HSQIVDSNHV AVTDTTTPQT PETRHHVQRC LFRGVRRRPW RKFAAEIRDR  60
KNKNGARVWL GTYDTPEDAA LAYDRAAFRL HGRKAKLYFP HLVGSNIEAI RVSNNNKKPS  120
SSSSSASSES PKLKRRRLQP GFENGIKQWR S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134138KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-32ERF family protein