PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53279.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 178aa    MW: 20026.5 Da    PI: 10.1033
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-1872123255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g ++AeIrd s+n+k +r++lg+f t+e+Aa a+++a+ +l+g
  GAY53279.1  72 CFRGVRRRP-WGTFAAEIRD-SKNKKGARVWLGTFVTPEDAALAYDRAAFRLHG 123
                 69*******.**********.334456**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MYTENISESE FAILKSIRQY LLEDDGFDFD LFPTPFPSES TTSSDDCNSS GIAAVATTPR  60
TPESQHHHVR RCFRGVRRRP WGTFAAEIRD SKNKKGARVW LGTFVTPEDA ALAYDRAAFR  120
LHGQKAKLNF PHLVASNTEV NRVKTKNRLA STEPPSSSST SSEASMLKRR RLMNQLGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168172KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-27ERF family protein