PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53403.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 134aa    MW: 15358.6 Da    PI: 8.0489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-082370455
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +h+ +Er RR +iN+++  L++++P +   + k +   ++L + ++Y++sLq
  GAY53403.1 23 SHSLAERVRRGKINERLRCLQDIVPGC---Y-KTMGMTMMLDEIINYVQSLQ 70
                8*************************9...3.44777899********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MKEEEKSKEV VHVRARRGQA TDSHSLAERV RRGKINERLR CLQDIVPGCY KTMGMTMMLD  60
EIINYVQSLQ NQVEFLSMKL TAASTFYDFN SESDAVETMQ KAKAYEAKEM ERLMKEGNFA  120
CSSSSSFLTI TRPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.11e-62bHLH family protein