PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53412.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 327aa    MW: 37125.6 Da    PI: 8.0757
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53412.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.32e-5551311129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+++yL++kv++ +++  +++ +vdi+k+ePwdLp k++ +ekewyfF  rd+ky+tg r+nrat++gyWk+tgkdke+++  g l
  GAY53412.1   5 LPPGFRFHPTDEELITYYLTRKVSDVSFRS-KAVVDVDINKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-AGVL 101
                 79*************************999.88***************988999****************************************.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129
                 vg+kktLvfykgrapkgek++Wvmheyrle
  GAY53412.1 102 VGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 131
                 ****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MEENLPPGFR FHPTDEELIT YYLTRKVSDV SFRSKAVVDV DINKCEPWDL PGKASMGEKE  60
WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRAGV LVGMKKTLVF YKGRAPKGEK  120
SNWVMHEYRL ENKHPFRSSK EEWVVCRVFQ KSAAAVKKPQ HTPSSQPSDE SLCDTNSMVN  180
EFGDIELPNL HGIANLTSGF GNIPSTHSYS SDNSNVNNLN MTNNMNLNMN WAAASLPSLT  240
WPSSLLSPNL SMNSLLLKAL QYRNYQAREA TSNEHNSFLQ QQGGINSRFE SDLSSNFQAS  300
SSSKVILDSV VPQQTQQEQP FNLDSIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-110NAC family protein