PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53605.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 171aa    MW: 19365.4 Da    PI: 8.4658
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1576.5e-1834118290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +++ Y+k+ GF v +++s+k    g   + tf C ++g++++++ k     +++++ +tgC+a+l   + +dgkw + +l+l+HnH+l 
  GAY53605.1  34 YFKGYSKRKGFPVLRRTSRKD-SYGILRNVTFACGRSGETRSKSVK---ILKPQPNAKTGCNARLGAGLGDDGKWTIRSLNLDHNHALL 118
                 799*************99998.7888************99998766...99************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEKDIEIEEL EKIEEDDEPI IGMSFDSDTD LFIYFKGYSK RKGFPVLRRT SRKDSYGILR  60
NVTFACGRSG ETRSKSVKIL KPQPNAKTGC NARLGAGLGD DGKWTIRSLN LDHNHALLTP  120
TKSKQDKETE VVIKMLLELE VISYECSKIA AFLHHQPKVI IKAEVLVLIK Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.19e-12FAR1 family protein