PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY53775.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 90aa    MW: 10645.3 Da    PI: 11.9458
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY53775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.42.1e-102665546
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     T+eE++ +++ + q G++ W++ a+++  +R+++++++ w++
       GAY53775.1 26 TKEEEDVIINIHMQVGNK-WSAMAKKLA-HRSANDIRDQWRT 65
                     89****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MRSSPSTRGR WLNHLLPNIV KHVNSTKEEE DVIINIHMQV GNKWSAMAKK LAHRSANDIR  60
DQWRTIVRKR FLLRHMSPSL SLFRDDGMQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-18MYB family protein