PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY54489.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 83aa    MW: 9882.02 Da    PI: 4.5671
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY54489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.4e-08856348
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48
                      W+ eE + + ++v+++ ++     W +I + ++ ++t  ++k ++ k++
       GAY54489.1  8 QWSWEENKAFENGVALYYKEgqdeEWVKIHSLVP-TKTIDEIKVHFKKLM 56
                     7*****************99**************.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MSGSNQKQWS WEENKAFENG VALYYKEGQD EEWVKIHSLV PTKTIDEIKV HFKKLMEDLE  60
LIEFGFEPVS IDYHQQYKNE DGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.12e-14MYB family protein