PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY54794.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 234aa    MW: 25825.6 Da    PI: 7.8761
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY54794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.9e-213585155
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  GAY54794.1 35 PRYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 85
                68********.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MRRARGAATT TAATKQLIEP NGSAARTAAA AGKEPRYRGV RKRPWGRFAA EIRDPWKKTR  60
VWLGTFDSAE DAARAYDAAA RTLRGPKAKT NFPIHNTNVS SYYPNNNNDP FLDQRLYGSV  120
FHDIQDQQIV NPQRPTTSSM SSTVESFSGP RPPHPPQRSA NLTDGSRRYP RTPPVVPEDC  180
HSDCDSSSSV IDDDGDIALS SCRKSLLPFD LNFPPLDDVD FNGDDDLQCT ALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.13e-34ERF family protein