PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY54865.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 223aa MW: 25475.1 Da PI: 8.4302

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY54865.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.7	3.7e-17	111	198	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 f k++++s+v+ +l lp +f++ ++ + ++ ++e+esg+++++++ s+r+ l++GWk F +an+L egD++vF+l++ ++f + + GAY54865.1 111 FWKAMVKSNVSHGFWLHLPMRFCKFNMP--KIDTVFIVENESGEEYKINY----ISQRTALSGGWKAFSDANQLYEGDVLVFHLVEPTRF--KAYI 198 6799*****************88863..477899**********....566778*********************9976666..4444 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MEEQSEPETP LLQTTKIKRK KTAESKMKLT QVSEKPLDPD STPELVRESS FIAPHLLEIF 60 VQGAFDSSKE SKSRRKRAMI DDLYDHAKVN SPVIERAEEV RANLAPSYPS FWKAMVKSNV 120 SHGFWLHLPM RFCKFNMPKI DTVFIVENES GEEYKINYIS QRTALSGGWK AFSDANQLYE 180 GDVLVFHLVE PTRFKAYIVR ANGFGNVNAD AKPLNSVSHW MMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	4e-35	B3 family protein