PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY54866.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 194aa    MW: 22355 Da    PI: 5.6832
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY54866.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.3e-1653138194
                 EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k +++s+v+   +l lp +f++eh     +++  +tl de+ +++  k+  +k++    l++GW++F  +++L +gD +vF+l++  +f  +v
  GAY54866.1  53 FVKPMLQSHVTGGFWLGLPVHFCKEHlP---HSDEIVTLVDEEENEFPTKYLAEKTG----LSGGWRGFSIDHELVDGDCLVFQLIKPATF--KV 138
                 89************************42...34557***************555555....***********************9986555..44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MFAYLILFMR LTCRSYQRRN LLNRVYASDE ERASAIDRAD EVQSGLDSQY PSFVKPMLQS  60
HVTGGFWLGL PVHFCKEHLP HSDEIVTLVD EEENEFPTKY LAEKTGLSGG WRGFSIDHEL  120
VDGDCLVFQL IKPATFKVFI IRVYVSEFND DNSDVNKKNK ENENEDNSKE NKEDSSARNT  180
RSAKRTRSSN LFKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-62B3 family protein