PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY54916.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 335aa    MW: 36605.5 Da    PI: 7.5966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY54916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.72.1e-13106149855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  Er RR+++++ f++L +llP++     +K +K++i+ +Av YIk Lq
  GAY54916.1 106 TERERRKKMRNMFANLHSLLPQL----PPKADKSSIVDEAVSYIKTLQ 149
                 6*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MALEFLDEGG GGGGEGGLLH EGFFMENPAW APLVSDTTLA PPQPSSSKSP KLNKKQETSQ  60
GSSKKRARGE GGGEVGKDGN LLKVSDDKKA VKVKEGESEH EIHIWTERER RKKMRNMFAN  120
LHSLLPQLPP KADKSSIVDE AVSYIKTLQQ TLRKLQKQKL ERLQGVASFG FEASAAITPQ  180
NKLAIVAHDH QQGSSSNLLG ANSTDATNNS SNLLSVSPTY PVIFQTWTSS NVVLNICGDE  240
AHISICSPKK PGMFSTICYV LEKHKIEVIS AQVSSDLTRR MYMIQVHVNG ASDQFSEALP  300
VEEMYKQAAS ELMFWISSCI TPAGNQPEQT CVFRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-22bHLH family protein