PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55014.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

STAT

Protein Properties

Length: 669aa MW: 75061.2 Da PI: 6.2876

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	192.3	5.1e-60	215	333	1	119
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfle 99 ldvvllna+gqpv+k+ve+ a+Llyad+g++vek++d eapLL+sydG+ef+++drp+kll+GrasfklkisqLsskcdnrLf+i+fe+pkl +pfle GAY55014.1 215 LDVVLLNAFGQPVNKEVEITAALLYADNGILVEKTSDGEAPLLTSYDGIEFPTYDRPSKLLNGRASFKLKISQLSSKCDNRLFCIRFEVPKLVGFPFLE 313 8************************************************************************************************ PP STAT 100 avskpirCisrsrntrsssl 119 ++s pirCisr+r+ r+ s+ GAY55014.1 314 VLSYPIRCISRTRTIRTFSV 333 *************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MGENVIKGED YYLLKDLRFK IEGDEEGFSL CFWVYLMKST TFSATLISQV DIGGNAPFLA 60 LNEKKILMLF PFISLHKEAP DPGKSAPLTE LQHASMDTEF PLESWIHVGC RVSTDSVQLH 120 IDGEIVAEKP VSSSFCKGSM SNSRTKITLV GSNMQGYVHD AKILPLNLSI KDHYHKDPPL 180 LLSIDTSSAS EIEEDSDGVW SIVGGKASCR RIFSLDVVLL NAFGQPVNKE VEITAALLYA 240 DNGILVEKTS DGEAPLLTSY DGIEFPTYDR PSKLLNGRAS FKLKISQLSS KCDNRLFCIR 300 FEVPKLVGFP FLEVLSYPIR CISRTRTIRT FSVPFKRTPA SIHPTNGSQS CGFDDGSLKI 360 HHNTVLEAKP SPSSKRVRLE QEKISAMEQL DGECSPHPLT ANKAEGTFAK GLDGTHENTE 420 DADVSPADYE SKGVRNVALK NSGKSVSDLT IFKYCLGGLA DRSHLLKEIV TSFSDEEILE 480 FAHQVSIYTG CSHHRFQIMT AKRLIEEGRN AWNLISQNNP HVHWDCAVFE IEEQFKKISC 540 CSTRPLSHQD FELLRRIAGC RDFLAQENFE KLWCWLYPVA FTLSSDWINK TWRSTSPKWI 600 EGFITKEEAE YSLQGPRGLQ EPGTFVLRFP TSRNWPHPDA GSLIVTYVGS DYTLHHRQDR 660 ENSLSLLQI

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MGENVIKGED YYLLKDLRFK IEGDEEGFSL CFWVYLMKST TFSATLISQV DIGGNAPFLA  60
LNEKKILMLF PFISLHKEAP DPGKSAPLTE LQHASMDTEF PLESWIHVGC RVSTDSVQLH  120
IDGEIVAEKP VSSSFCKGSM SNSRTKITLV GSNMQGYVHD AKILPLNLSI KDHYHKDPPL  180
LLSIDTSSAS EIEEDSDGVW SIVGGKASCR RIFSLDVVLL NAFGQPVNKE VEITAALLYA  240
DNGILVEKTS DGEAPLLTSY DGIEFPTYDR PSKLLNGRAS FKLKISQLSS KCDNRLFCIR  300
FEVPKLVGFP FLEVLSYPIR CISRTRTIRT FSVPFKRTPA SIHPTNGSQS CGFDDGSLKI  360
HHNTVLEAKP SPSSKRVRLE QEKISAMEQL DGECSPHPLT ANKAEGTFAK GLDGTHENTE  420
DADVSPADYE SKGVRNVALK NSGKSVSDLT IFKYCLGGLA DRSHLLKEIV TSFSDEEILE  480
FAHQVSIYTG CSHHRFQIMT AKRLIEEGRN AWNLISQNNP HVHWDCAVFE IEEQFKKISC  540
CSTRPLSHQD FELLRRIAGC RDFLAQENFE KLWCWLYPVA FTLSSDWINK TWRSTSPKWI  600
EGFITKEEAE YSLQGPRGLQ EPGTFVLRFP TSRNWPHPDA GSLIVTYVGS DYTLHHRQDR  660
ENSLSLLQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein