PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55494.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

GeBP

Protein Properties

Length: 415aa MW: 45616.7 Da PI: 5.4969

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	108.5	4.7e-34	158	254	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 lfqrlwse+Dei++L+ +i++ +++g +ps+d++afy++vk+s++ +++k ql++KirrLKkK ++ +k ak+g +fs++h+q +++lskk+W+ GAY55494.1 158 LFQRLWSEDDEIIVLKRMIEYSTEKGLDPSQDTQAFYDYVKNSLHGDYTKAQLMDKIRRLKKKCVNNLRKsAKKGGVRTFSNPHEQRAYDLSKKLWE 254 79************************************************************99998878999*******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MAPKKPNPRE EPPAASSSAE EEEEEDDSSG SELEVSSSSS DDDGEEEEKD TQGQDHATTM 60 LPKTQKQPAL KKPEATAQTK APSSESESES ESGSEPGASP KPSEATKPTS SKRPNEAENK 120 EAANAKDSKR AKKNGGADEE LHKKEPGEDT KKQQPPPLFQ RLWSEDDEII VLKRMIEYST 180 EKGLDPSQDT QAFYDYVKNS LHGDYTKAQL MDKIRRLKKK CVNNLRKSAK KGGVRTFSNP 240 HEQRAYDLSK KLWEGSEEST GGVMAFSAAK SYKKNQSQRG NNELLAALKA ELLGDEGAVG 300 DKKGDAAVFF DKTLGVAGLE EFVLRDGFNM ISGAKKAELE ERWKNLQVAQ LKLFLQRNEL 360 IKEQALLILE ASRKNLQVYC LGGQLNNETI TDRASSILQI SHGGAVMKIG RGRAT

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MAPKKPNPRE EPPAASSSAE EEEEEDDSSG SELEVSSSSS DDDGEEEEKD TQGQDHATTM  60
LPKTQKQPAL KKPEATAQTK APSSESESES ESGSEPGASP KPSEATKPTS SKRPNEAENK  120
EAANAKDSKR AKKNGGADEE LHKKEPGEDT KKQQPPPLFQ RLWSEDDEII VLKRMIEYST  180
EKGLDPSQDT QAFYDYVKNS LHGDYTKAQL MDKIRRLKKK CVNNLRKSAK KGGVRTFSNP  240
HEQRAYDLSK KLWEGSEEST GGVMAFSAAK SYKKNQSQRG NNELLAALKA ELLGDEGAVG  300
DKKGDAAVFF DKTLGVAGLE EFVLRDGFNM ISGAKKAELE ERWKNLQVAQ LKLFLQRNEL  360
IKEQALLILE ASRKNLQVYC LGGQLNNETI TDRASSILQI SHGGAVMKIG RGRAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	3e-27	GeBP family protein