PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55579.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HB-other

Protein Properties

Length: 1722aa MW: 193584 Da PI: 5.284

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58	1.6e-18	21	77	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + kR t++qle+Le+ ++ ++yps++ r+eL+++lgL++rq ++WF+ rR k++k GAY55579.1 21 KTKRKMKTASQLEILEKTYAVESYPSEALRAELSAQLGLSDRQLQMWFCHRRLKDRK 77 6799***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1722 aa Download sequence
MEAASEAEEK KKKKPLEAEV KTKRKMKTAS QLEILEKTYA VESYPSEALR AELSAQLGLS 60 DRQLQMWFCH RRLKDRKAPT AKRQPKDFQS LVPAGEKELA GSELVRGGMA VQRFYEVPMA 120 PMLPFPLPQR NIAEMRAIAF VESQLGEPLR EDGPILGVEF DSLPPDAFGR PIGPAAMGHQ 180 KHSVRPLEAK EYERLDVKPF KDMFTIHPQG ATRTVHEYKF LPEQPTVRSE THEKAASSYP 240 YGSPADGSTA RNSSLRAGHP FMHGSEQISS GYGFPGQLPN LNLLSHQGRH SHLLPSVSGE 300 YENILRKNSF ISAGMDAHVG GQPITAMDNA FISSDRRVSH DEDVSRTEKK RKSEEARIAR 360 EVEAHEKRIR KELEKQDILR RKREEQIRKE MERQDRERRK EEERLLREKL REEERYLREQ 420 RRELERREKF LQKESIRAEK RRQKEELRRV KEAERLKVAN ERAVARRIAK ESMALVEDER 480 LELMELAASS KGLPTIVSLD FETLQNLDLF RDRPCTFPPK SVQLKRPFAV QPWNDSEDNI 540 GNLLMVWRFL ITFADVLGLW PFTLDEFVQA FHDYDPRLLG EIHVALLRSV IKDIEDAAKT 600 PFTGLGANQN SAVNPGGAHP QIVEGAYAWG FDIRSWQLHL NALTWPEILR QFALSAGFGP 660 QLNKRNIEKM YPHDNNEGND GENIISNLRN GSAVGNAVAI MHEMGLSNLR RSRHRLTPGT 720 VKFAAFHVLS LEGSEGLTIL EVADKIQKSG LRDLTTSKTP EASIAAALSR DTKLFERTAP 780 STYCVRAAYR KDPGDADAIL SAARERIRVF KRGFVDGEEA DDAERDEERD EDSDSDVPEV 840 PDVYDMDTDL NSKEETHESL EANSCGAKTP LGNREANIKG IESPQGDLGN SGRGLSSKNS 900 EDFDEIKGTG ALTDHCEDAA GISNAATPDQ THTDINESHP GEPWVQGLTE GEYSDLSVDE 960 RLSALVALIG VAIEGNSVRI ALEERLEAAN ALKKQMWAET QLDKRRIKED CMLKMQYSSY 1020 MGNKAEPSLA ISSADGRQSP LVTVDDKSNG MLVDLNLQQG QFGEPQKDQN CNTSMPPEGN 1080 QDYPVGPDNL VNQQSAYAAE KSRMQLKSYI GQKAEETYVC RSLPLGQDRR RNRYWRFITS 1140 MSENDPGCGR IFVELCDGRW RLIDSEESFD ALLTSLDVRG LRESHLHSVL QMIEMSFKET 1200 VRRNLQHVTT EVQNQETVKA EVIERASCPD YTGTDNPSNI VCDSDSEISD TSTSFSIELG 1260 RDDVLRNDAL KRYQDYERWM WKECVNSSIL CAMEYGKKRC KQVLGVCDYC HDLYFFEDSH 1320 CPSCHKTFDT SKRYLNFSEH VAQCQGKLKM NPAWSSCTSF SSPLRIRLLK VLLALFEGSV 1380 PSEAFQSIWN DSYRNSWGMK LNSSLSADSL VQILTQLENA IKRDYLSSNF ETTSLRLMEL 1440 DRSIAYLPHQ RVEFQKEKRE GNLMLPSKYA AVKNTRDGED QVNYLQVEEA NRVGVGIGFA 1500 APSHGRGICG GARGCLNTGR SQKRVAGSRR DSGKRSTNTK SGRLVLVLKG QSHGQGSRKR 1560 GRRSARSRRK STKRVVVEKD APKQSIFDKP RDLAGDGWNR DEIPRLQVDD AENASISGRS 1620 GYGEENGQAT GDEYNDMIDE YAGGFNSRSN DLQEGSDDIV DGDEEDDEDE MGDGGAEDEQ 1680 GYLDVEEYVN EESDEEGIRD GDGGQIGDPD EGTGASSSDL SD

Sequence ? help Back to Top

Protein Sequence Length: 1722 aa Download sequence

MEAASEAEEK KKKKPLEAEV KTKRKMKTAS QLEILEKTYA VESYPSEALR AELSAQLGLS  60
DRQLQMWFCH RRLKDRKAPT AKRQPKDFQS LVPAGEKELA GSELVRGGMA VQRFYEVPMA  120
PMLPFPLPQR NIAEMRAIAF VESQLGEPLR EDGPILGVEF DSLPPDAFGR PIGPAAMGHQ  180
KHSVRPLEAK EYERLDVKPF KDMFTIHPQG ATRTVHEYKF LPEQPTVRSE THEKAASSYP  240
YGSPADGSTA RNSSLRAGHP FMHGSEQISS GYGFPGQLPN LNLLSHQGRH SHLLPSVSGE  300
YENILRKNSF ISAGMDAHVG GQPITAMDNA FISSDRRVSH DEDVSRTEKK RKSEEARIAR  360
EVEAHEKRIR KELEKQDILR RKREEQIRKE MERQDRERRK EEERLLREKL REEERYLREQ  420
RRELERREKF LQKESIRAEK RRQKEELRRV KEAERLKVAN ERAVARRIAK ESMALVEDER  480
LELMELAASS KGLPTIVSLD FETLQNLDLF RDRPCTFPPK SVQLKRPFAV QPWNDSEDNI  540
GNLLMVWRFL ITFADVLGLW PFTLDEFVQA FHDYDPRLLG EIHVALLRSV IKDIEDAAKT  600
PFTGLGANQN SAVNPGGAHP QIVEGAYAWG FDIRSWQLHL NALTWPEILR QFALSAGFGP  660
QLNKRNIEKM YPHDNNEGND GENIISNLRN GSAVGNAVAI MHEMGLSNLR RSRHRLTPGT  720
VKFAAFHVLS LEGSEGLTIL EVADKIQKSG LRDLTTSKTP EASIAAALSR DTKLFERTAP  780
STYCVRAAYR KDPGDADAIL SAARERIRVF KRGFVDGEEA DDAERDEERD EDSDSDVPEV  840
PDVYDMDTDL NSKEETHESL EANSCGAKTP LGNREANIKG IESPQGDLGN SGRGLSSKNS  900
EDFDEIKGTG ALTDHCEDAA GISNAATPDQ THTDINESHP GEPWVQGLTE GEYSDLSVDE  960
RLSALVALIG VAIEGNSVRI ALEERLEAAN ALKKQMWAET QLDKRRIKED CMLKMQYSSY  1020
MGNKAEPSLA ISSADGRQSP LVTVDDKSNG MLVDLNLQQG QFGEPQKDQN CNTSMPPEGN  1080
QDYPVGPDNL VNQQSAYAAE KSRMQLKSYI GQKAEETYVC RSLPLGQDRR RNRYWRFITS  1140
MSENDPGCGR IFVELCDGRW RLIDSEESFD ALLTSLDVRG LRESHLHSVL QMIEMSFKET  1200
VRRNLQHVTT EVQNQETVKA EVIERASCPD YTGTDNPSNI VCDSDSEISD TSTSFSIELG  1260
RDDVLRNDAL KRYQDYERWM WKECVNSSIL CAMEYGKKRC KQVLGVCDYC HDLYFFEDSH  1320
CPSCHKTFDT SKRYLNFSEH VAQCQGKLKM NPAWSSCTSF SSPLRIRLLK VLLALFEGSV  1380
PSEAFQSIWN DSYRNSWGMK LNSSLSADSL VQILTQLENA IKRDYLSSNF ETTSLRLMEL  1440
DRSIAYLPHQ RVEFQKEKRE GNLMLPSKYA AVKNTRDGED QVNYLQVEEA NRVGVGIGFA  1500
APSHGRGICG GARGCLNTGR SQKRVAGSRR DSGKRSTNTK SGRLVLVLKG QSHGQGSRKR  1560
GRRSARSRRK STKRVVVEKD APKQSIFDKP RDLAGDGWNR DEIPRLQVDD AENASISGRS  1620
GYGEENGQAT GDEYNDMIDE YAGGFNSRSN DLQEGSDDIV DGDEEDDEDE MGDGGAEDEQ  1680
GYLDVEEYVN EESDEEGIRD GDGGQIGDPD EGTGASSSDL SD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	349	375	KKRKSEEARIAREVEAHEKRIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein