PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55586.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 258aa MW: 29146.3 Da PI: 10.0524

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.1	5.1e-34	20	160	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyW 83 lp+G++F+Ptd+el+ e+L++kv+++ ++ e +++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +W GAY55586.1 20 LPAGVKFDPTDQELL-EHLEAKVRADArklhplID--EfipTLEGEnGICYTHPEKLP-GVSKDGLIRHFFHRPSKAYTTGTRKRRKVHtdeqggETRW 114 799**********.99*999956643322..22222333336******.555555677***************744456555778 PP NAM 84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++tgk+++v+ +g+++g kk+Lv+y g+++k+ekt+Wvmh+y+l GAY55586.1 115 HKTGKTRPVFI-GGKVKGYKKILVLYtnYGKQKKPEKTNWVMHQYHL 160 *********.9*********6658999**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MVIMIRWPFF KARIHDLPGL PAGVKFDPTD QELLEHLEAK VRADARKLHP LIDEFIPTLE 60 GENGICYTHP EKLPGVSKDG LIRHFFHRPS KAYTTGTRKR RKVHTDEQGG ETRWHKTGKT 120 RPVFIGGKVK GYKKILVLYT NYGKQKKPEK TNWVMHQYHL GGNEEEKDGE LVVSKVFYQT 180 QPRQCGNSVI KDSSSLPPKF NINKGQSGLD GLKNNPGVVD YYNPPFIAFD QGGGQNRASP 240 PQALIPPHFA AHDTSFIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-115	NAC family protein