PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55587.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HD-ZIP
Protein Properties Length: 179aa    MW: 20590.4 Da    PI: 7.4414
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.72.3e-191669356
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +R ++t++q++ Le++F+ n++++ +++ eLA++lgL+ rq+ vW+qNrRa+ek
  GAY55587.1 16 SRKRLTQDQVRLLETCFNANQKLQVDRKLELARRLGLPPRQIAVWYQNRRAREK 69
                6999************************************************99 PP
2HD-ZIP_I/II1032.6e-3317107393
  HD-ZIP_I/II   3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  ++rl+++qv+lLE++F++++kL+ +rK elar+Lgl prq+avW+qnrRAR k + +E dy+++++++d++ +en++Le+ev  L++elk+
   GAY55587.1  17 RKRLTQDQVRLLETCFNANQKLQVDRKLELARRLGLPPRQIAVWYQNRRAREKIHTIELDYKTIQQELDNVLAENRKLEQEVGMLKHELKK 107
                  79*************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MDLQFSSENR QPSKLSRKRL TQDQVRLLET CFNANQKLQV DRKLELARRL GLPPRQIAVW  60
YQNRRAREKI HTIELDYKTI QQELDNVLAE NRKLEQEVGM LKHELKKSQQ MLLASNPSAT  120
LLPSVSTSGD NDLTSSSSPL NMTCNWEDTG LLPMDELYSC LIRPQGQPEN HSMNDLSIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53980.14e-32HD-ZIP family protein