PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55627.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 239aa    MW: 26976.2 Da    PI: 6.52
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.8e-2099149255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp   + k +r++lg+f ta eAaka+++a+ k++g
  GAY55627.1  99 HYRGVRRRP-WGKYAAEIRDP---NkKGTRVWLGTFNTAVEAAKAYDNAAFKMRG 149
                 7********.**********9...4345*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MAAGHHHHQD HEALTLERIS QYLLNDLTPM DSYSFISNLP QQNPASTDEE ILVQKTSSTL  60
SQRKPSSINV RIPPPTTSIF KLKDEDKDFE VTDDYKERHY RGVRRRPWGK YAAEIRDPNK  120
KGTRVWLGTF NTAVEAAKAY DNAAFKMRGR KAILNFPLEI GEISLDSDEV QQVDCGKKRK  180
YEENEEFERK VTVKKEETVS GGVGLGPLTP SSWTGFWDDG NGIFSVPPLS PCFGQLGVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-61ERF family protein