PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55628.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 285aa    MW: 31275.8 Da    PI: 9.307
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20138188255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +gr++AeIrdp   + k  r++lg+f+ta eAaka+++a+ +l+g
  GAY55628.1 138 HYRGVRRRP-WGRYAAEIRDP---NrKGSRVWLGTFDTAVEAAKAYDNAAFRLRG 188
                 8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MASLNEASTL ELISQYLLAD QYFTSSIDHT HSFKNISNLP QSPSLFNNPT TTTTATTVTT  60
TTDRDNINSR NKPSSTLKQR KPACVKNVTI PQTTSFNLMS CSNVNDDADN PVAVKNKDPD  120
AAADNNTNNN NKNNEEKHYR GVRRRPWGRY AAEIRDPNRK GSRVWLGTFD TAVEAAKAYD  180
NAAFRLRGSK AILNFPLEVG GTLDSKVEVD RGKKRKYEET EGFQRNVVVK KEEETVTVGS  240
GGGVGVGPLT PSSWTGFWDG EKGIFTVPPL SPLSPYAGIS PLRVC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61600.11e-45ERF family protein