PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55638.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 247aa    MW: 27861.6 Da    PI: 10.1422
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55638.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-1394139247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++WT+ E+  ++++ k+lG+g+Wk I++ + ++Rt+ q+ s+ qky
       GAY55638.1  94 KPWTEAEHRVFLEGLKLLGKGDWKGISKNFVTTRTPTQVASHAQKY 139
                      58*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MRKCSHCGHN GHNSRTCHAK GCFKLFGVNI SDQIQDLPSM KKSVKKSYSV GNLQSLGGEF  60
NGHVDEGREF DGDVDEGYLS DGPIHTKHER KRGKPWTEAE HRVFLEGLKL LGKGDWKGIS  120
KNFVTTRTPT QVASHAQKYF LRQASNDKKN RRTSLFDMPL KESYPVPCNG RSNIVNSSQS  180
FISDQRPNYY ACMPMPAGMH KSLTRAPQSS QRSVRTTQEC PKLSMERDFL DLKIGLPQSP  240
KTARFII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-42MYB_related family protein