PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55639.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 204aa    MW: 23310.5 Da    PI: 10.073
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.81.3e-1372118147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +++WT++E+++++ + k lG+g+Wk I++ + ++Rt  q+ s+ qky
       GAY55639.1  72 KLPWTEDEHQKFLMGLKWLGKGDWKGISKNFVTTRTQTQIASHAQKY 118
                      689*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MCRSKGCVKL FGVNILEQKQ DHESNRSSSV TSFANLHYLE EPNAQVNAES LCEGQQLNFK  60
RRKVVREKRK RKLPWTEDEH QKFLMGLKWL GKGDWKGISK NFVTTRTQTQ IASHAQKYFN  120
RQASSSDNKN RRTSLFDMPL KEAYQIHCNG RMPAGICDNF SPCAPQLFQR SISRETDILE  180
LKIGPPQSPE MNSSSSQIFG VAVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16071KRRKVVREKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-18MYB_related family protein