PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55685.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 365aa    MW: 40995.3 Da    PI: 4.8065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.52.8e-1258107153
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                 s+y+GV+++++ ++W A++       k+ k ++lg+f  +eeAa a++ a+ + 
  GAY55685.1  58 SDYRGVSRNPNFKKWQARLGKT----KQtKAIYLGTFENEEEAAVAYDIAAIRV 107
                 78****************5442....235*********************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MDVHAKENYT HTHAYFRYFV NYDLNDSEKD LEEVIHMTKE EYLVPLRRKT IDCSKRASDY  60
RGVSRNPNFK KWQARLGKTK QTKAIYLGTF ENEEEAAVAY DIAAIRVKGV EAITNFDKSQ  120
YDVNGITASE KIPIGKGVSR FIKENSVNDV LIMKKRRTSR LPTLCLKRDS SHQVMINPQL  180
GSSSQSLASS EEQRNQVNQM TIDDFSHQHP NEFQTNNSSA DANLGSGLGF SSDDGVLEGL  240
IAMINDGENR QFTQQVLDDY PSSSLMKAYE NPNSLFVDGY QIPSNFPHQV HQNDLQTNNP  300
SFLTHQLGED GSGSASRISE GVSSDGIMEG CSTMMGNEDE DFAFDDFLDM QQMSTDGNFP  360
KMPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20840.18e-36AP2 family protein