PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY55845.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

HD-ZIP

Protein Properties

Length: 202aa MW: 22984.7 Da PI: 7.9982

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY55845.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.2	2.5e-17	23	73	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++eq+++Le+ F ++++++e + +LA++lg++ rqV vW+qN+Ra++k GAY55845.1 23 RLNQEQVRVLERSFTTKKKLDTELKLKLANQLGVPARQVAVWYQNKRARWK 73 689***********************************************9 PP
2	HD-ZIP_I/II	98.7	5.5e-32	21	111	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+rl++eqv++LE+sF++++kL++e K +la++Lg+ +rqvavW+qn+RAR+kt+ lE dy++++ ++++ ++++rLek+v+ L+eel++ GAY55845.1 21 KKRLNQEQVRVLERSFTTKKKLDTELKLKLANQLGVPARQVAVWYQNKRARWKTQSLELDYNTIQVKLENALADKRRLEKDVKLLKEELRQ 111 99*************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MDIADTQQNQ KHPPPNKLNI KKRLNQEQVR VLERSFTTKK KLDTELKLKL ANQLGVPARQ 60 VAVWYQNKRA RWKTQSLELD YNTIQVKLEN ALADKRRLEK DVKLLKEELR QAQEILFAKL 120 MTSNNNNNQE AVEAITCNNN SNYSSATSCS AEKAGSCSSF SLLHEEYHVH GNDHDHDQGL 180 QIDHELFACL IGNGGSAWGS NE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	5e-22	HD-ZIP family protein