PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY55860.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 188aa    MW: 21571.1 Da    PI: 9.015
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY55860.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.63.1e-1225278128
         NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                 t++gyW+ t kd ++ + ++ l+g+kk L+fy +g  +k   tdW mhey++
  GAY55860.1   2 TNAGYWHITSKDSQIEA-TNGLTGTKKFLTFYrRGLPRKEFITDWGMHEYHI 52 
                 789*************9.8889**********5567777789********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
RTNAGYWHIT SKDSQIEATN GLTGTKKFLT FYRRGLPRKE FITDWGMHEY HIKNDASYKR  60
EFVLCCIKRK WNKKKKSGIS TIDEGESSQQ LVFPPHQSPS DRSISNGIHS EKNTPTIPPQ  120
QSQNHNSIYY PQSITNDPPT QLSPSNGENI HTHQPLPLNH SEETTLKYPQ PWADPIKVQE  180
GLQLPLDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.25e-11NAC family protein