PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56111.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 200aa MW: 22776.5 Da PI: 4.9172

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.7	1.1e-36	13	131	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+v++L++kv+ +++ +vi+++d+y ++Pw+L+ k+ ae ++wyf+s++ +nr+t +gyWk g +++vl++ +++ GAY56111.1 13 LPPGFRFCPTDEELLVHFLQRKVALLPCHP-DVIPDLDLYPYDPWQLNGKALAEGNQWYFYSRK--------TQNRMTGNGYWKPMGIEESVLTRADKK 102 79***********************999.99**********977778899*997........4589******************* PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vglkk +f+ g+a+ g+kt+W+m+eyrl GAY56111.1 103 VGLKKYYIFHLGEASAGVKTNWIMQEYRL 131 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGDNINANAN VNLPPGFRFC PTDEELLVHF LQRKVALLPC HPDVIPDLDL YPYDPWQLNG 60 KALAEGNQWY FYSRKTQNRM TGNGYWKPMG IEESVLTRAD KKVGLKKYYI FHLGEASAGV 120 KTNWIMQEYR LSDSAAASSS NTSSSRSSKR RVNSKTDYSK WVICRVFERN CDDDDDGAEL 180 SCMDEVFLSL DDLDEISLPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	1e-81	NAC family protein