PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56151.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 306aa    MW: 33789.1 Da    PI: 9.6706
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-19171204134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C+ C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  GAY56151.1 171 CADCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 204
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MTPNYHLSPV TPFPLELKED QLLNLNQPPS SSSPASCHNF FEPVQREGGF YYRESVLLRH  60
PKEVRILYSQ AAGSCDHPGP AVMDESGSES TGLKLSMSSE KEERNDQNQS ENSSSVKWMS  120
SKMRLMKKMM YSSPDAAAMQ KLEDHQKQPP SSSLEPDNGN NNNNTNTIRV CADCNTTKTP  180
LWRSGPRGPK SLCNACGIRQ RKARRAMAAA AANGTAVQLA ADDTSSNKKK SKTPRPSNNN  240
SCLPFKKRCK YNSNSPSRGK KKLCSFEDLT LNLSKNNSSA LQRVFPQEEK EAAILLMALS  300
YGLVHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.17e-18GATA family protein