PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY56305.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 246aa MW: 28141.6 Da PI: 9.0293

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY56305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	154.5	4.7e-48	14	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrF+Ptd+elv +yLk kv +++l++ +i++++iyk++PwdLp + e+e yfFs+++ ky++g+r nrat+sgyWkatg dk++ls+ + GAY56305.1 14 LPPGFRFQPTDDELVFQYLKCKVFSSPLPA-PIIPHINIYKYDPWDLPGN---LEQERYFFSNNEAKYPNGNRINRATASGYWKATGLDKQILSSsriN 108 79*************************9.88***********54...46799********************************98777 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + l+g+kktLvfy+g+ap+ ++tdW+mheyrl GAY56305.1 109 QMLMGMKKTLVFYRGKAPHESRTDWIMHEYRL 140 788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MDNFHFVRDG VTRLPPGFRF QPTDDELVFQ YLKCKVFSSP LPAPIIPHIN IYKYDPWDLP 60 GNLEQERYFF SNNEAKYPNG NRINRATASG YWKATGLDKQ ILSSSRINQM LMGMKKTLVF 120 YRGKAPHESR TDWIMHEYRL VTAATNQPSS RNYSKEMENW VICKIFMKKR TRKDDANDGT 180 NGVALPDQPQ PRFYDFMMRD RIGSCAATSS CSSTSSYRGI SGISSNGSEY DDDGESSSGK 240 NINFLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	1e-77	NAC family protein