PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56375.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 334aa    MW: 36716.7 Da    PI: 6.1043
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.19.2e-17229263135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  GAY56375.1 229 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 263
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
METPEFYIGG YFNAASTNNF SSEKRVVVAA DQKPGENFNF TVEDLLDFSN DDAIMNDGGF  60
FENVAANSTD SSTVTSNSAV SGGENNFPAN FSGCRSSNSF ADSQFCGELC VPYDDLAELE  120
WLSNFVEDSF SMDQTLQKSD LEFLSGSKSL TPESSSSSTR LEPVSPKASN PVFLPETPLP  180
GKARSKRSRA APCDWSTRLL HVSPKGPSVE RESPNPLMHT ESGDSVRKCL HCASEKTPQW  240
RTGPMGPKTL CNACGVRYKS GRLVPEYRPA ASPTFVSAKH SNSHRKVMEL RRQKEMQRAP  300
QQQFLGQRSI FGVSNGADDY LIHHPSGPDF RHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-74GATA family protein