PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56392.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 279aa    MW: 30946.2 Da    PI: 6.2554
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.37.1e-133478347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE+ l++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
       GAY56392.1 34 PWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKY 78
                     8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
PCLLARRACA GASLPLAFTF CLHMDVNKRQ IGVPWTEEEH RLFLIGLQKL GKGDWRGIAR  60
NYVMSRTPTQ VASHAQKYFI RQSNATRRKR RSSLFDMVAD DMATDTPLVP EEQIMLPSPL  120
ARESDNTSSQ PSLNLSLSTE FEPMEAVCKE TEKDSEEPVI DLNEFTPMVS SFFPAYMPVP  180
YTYWPHNAAT GEEDKDAGTS GNHPILKPIP ILPKEPVNVD QLVGMSQLSI GETERGLREP  240
SPLSLKLLGE PSRQSAFHAN APVSRSDLSK GKTTPIQAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.12e-69MYB_related family protein