PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56640.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HSF
Protein Properties Length: 367aa    MW: 41090.6 Da    PI: 4.791
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.43.6e-36181102103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+++ed+++++++sws+++nsf+v++  ef++++LpkyFkhsnf+SFvRQLn+YgF+kv+ ++          eF+++ F +g+k+ll++i 
    GAY56640.1  18 FLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDR---------YEFANEGFLRGQKHLLKSIS 105
                   9*****************************************************************99.........78****************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k +
    GAY56640.1 106 RRKPA 110
                   *9965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MESMSSSSAA NGNSLPPFLS KIYDMVEDPS TNDIVSWSSS NNSFIVWKVA EFSRDLLPKY  60
FKHSNFSSFV RQLNTYGFRK VDPDRYEFAN EGFLRGQKHL LKSISRRKPA QVHGQQQPKL  120
QNSSVGACVE VGKYGLEEEV EILKRDKNVL MQELVRLRQQ QQATDRQLHT VGQRVQVMEQ  180
RQQQMINLST FLIDNIPSAN ALENGHSSSQ ISGVTLSEVP PNSGQSNMST ESRFHVPSSA  240
ISEIQCSPCV SDSVKVNPTQ EKKNLDPTAL DGTMSIDADA FSPDHDVDVS PDGIHKLPRI  300
DDAFWEEFLT ASPLPGDTDE INSSPLESGM TSELEQQPEQ ANGWDNFQHM DHLTEQMGLL  360
TSESRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.13e-84HSF family protein