PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56678.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 377aa    MW: 41405.6 Da    PI: 8.5616
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56678.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.15.2e-12629226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                k  lCr+f+r G C+yG+rCkF H+
  GAY56678.1  6 KKDLCRNFQR-GSCQYGERCKFLHV 29
                889*******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MMPYKKKDLC RNFQRGSCQY GERCKFLHVT QQQPNPFGFG VQNNPQSKGT NNYNFGNKQN  60
QSKPFENKWT RFSPITGGGV PASRQPDNQP LSANHKCSDP DSCKRIIAED FELERPLWKF  120
TCYGHWKNAP CDIVGDISYE ELRAAAYDDA KRGSSLHSIV ERERNLLNSN LMKFDNLLRN  180
PYTGPCNSAL SGQSPFAAAS PNAFSPTPQD SAAPSLSSFN QVGSLPSLEA LTKFVDQLFS  240
GPLHHQIMPL ANQVPFQIPA RLQVLSEQTI FHRQVVAIRS PFTSGMTSLS NNGVVGFGSN  300
KISTPIFATH NPLFGNQSSI PSGGPVSTST AAEQATTNIQ MVKNLQNGAV LGDTSVWLKV  360
KWIPGEIPEE APPDAFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.22e-79C3H family protein