PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56681.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 231aa    MW: 25824.8 Da    PI: 8.8936
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH382.7e-12629226
                -S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                k  lCr+f+r G C+yG+rCkF H+
  GAY56681.1  6 KKDLCRNFQR-GSCQYGERCKFLHV 29
                899*******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MMPYKKKDLC RNFQRGSCQY GERCKFLHVT QQQPNPFGFG VQNNPQSKGT NNYNFGNKQN  60
QSKPFENKWT RFSPITGGGV PASRQPDNQP LSANHKCSDP DSCKRIIAED FELERPLWKF  120
TCYGHWKNAP CDIVGDISYE ELRAAAYDDA KRGSSLHSIV ERERNLLNSN LMKFDNLLRN  180
PYTGPCNSAL SGQSPFAAAS PNAFSPTPQD SAAPSLSSFN QVGSLALYTI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.17e-69C3H family protein