PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY56959.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 167aa    MW: 19651.5 Da    PI: 9.8221
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY56959.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.31.4e-1081121128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                 lp Gf+F+P+deel+++yLkkkv g  + l+e  i++   y++    L+      ++++yfF++ +kk+++g+ + +++            +v+     
  GAY56959.1   8 LPHGFQFRPSDEELIKHYLKKKVLGILILLAEYfIRD---YSHGGPLLN-----VDEDLYFFTQLKKKSSKGELTAKSVP-----------PVVL---G 84 
                 699**********************997775543554...444444454.....46899********9998877766533...........5666...2 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                 +  + k + f k  +    +  W+mhey+l
  GAY56959.1  85 KGRMPKWFRFEK--KGCEAHGAWIMHEYTL 112
                 346778888873..3333467888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MQEHRPFLPH GFQFRPSDEE LIKHYLKKKV LGILILLAEY FIRDYSHGGP LLNVDEDLYF  60
FTQLKKKSSK GELTAKSVPP VVLGKGRMPK WFRFEKKGCE AHGAWIMHEY TLHFPKNQAT  120
NYVLCRLRKN QPTGQDKEYG SENKRKLNDF RHNSNQSEQV TDTDVER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.19e-07NAC family protein