PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57001.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 234aa    MW: 25873.1 Da    PI: 5.826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-2056105255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa a+++a++k++g
  GAY57001.1  56 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEDAAMAYDKAALKFKG 105
                 7********.**********94....45************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MSAMVSALTQ VIGTTTTDAD ADPSPAAVKE ESSDNPLQQT QTQTQDQDQE GTRRRHYRGV  60
RQRPWGKWAA EIRDPKKAAR VWLGTFETAE DAAMAYDKAA LKFKGTKAKL NFPERVQGTT  120
EFVYLDSSSS SSAFHHHHES VMPAPPPRPT SMHHGAYPDL LQYAQILSSD DATFNYYTSN  180
LFNPQSSSCS SSTPSTFSSS TTSLEQQQEM TRFSSNYESL SGSDFQDHSN NPNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-37ERF family protein