PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57061.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

Protein Properties

Length: 357aa MW: 41911.1 Da PI: 8.9562

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.6	3.1e-15	32	119	3	97
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 k+ + vl+++ l++p++f++++g++ s +l+ ++g +W+v l ++k++ +++ GW++Fv++ + +g f+ F+++++s+f +v +f GAY57061.1 32 KII-FPFVLAEKKLRIPRDFVKKFGHE--LSNGAQLTVPDGSVWQVAL--TRKGKDIWFHYGWEDFVESYSISAGYFLFFSYEKNSTF--HVIIF 119 544.355777788*********966..777899*********..9*****************************999999..88777 PP
2	B3	37.5	4.2e-12	231	308	14	94
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 + ++ p kfa+++ +k + +++++ +e +s e++ k +g+++lt+GW + + ++LkegD+++F+l+++++ +++ GAY57061.1 231 RDVYCPIKFAAKFVKKDSKYVKVQISNEVKESIELQW---KPKGGFFLTRGWAKISRVKNLKEGDICIFELIRKQDLLFKL 308 446789999999766667778888888888888887...5556899***********************9876664444 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MTERAAATWL FEQQWMKRLN PGADVSSPHF FKIIFPFVLA EKKLRIPRDF VKKFGHELSN 60 GAQLTVPDGS VWQVALTRKG KDIWFHYGWE DFVESYSISA GYFLFFSYEK NSTFHVIIFN 120 LDACEVDYLY VGEESMNDEQ NSDPENEKSV EHVEQQSRKR KMEEVAEMDE PNSDNNFNLS 180 VVLKKMGIYV TPRYRRFSAE ESKRAISFAR IVQPKNSSFM VILEQHFKSC RDVYCPIKFA 240 AKFVKKDSKY VKVQISNEVK ESIELQWKPK GGFFLTRGWA KISRVKNLKE GDICIFELIR 300 KQDLLFKLSV FHMSFTSAVD TLPFAMKVKH NEEDPAQNLL EVFYFVLIKQ YNRIYKT

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MTERAAATWL FEQQWMKRLN PGADVSSPHF FKIIFPFVLA EKKLRIPRDF VKKFGHELSN  60
GAQLTVPDGS VWQVALTRKG KDIWFHYGWE DFVESYSISA GYFLFFSYEK NSTFHVIIFN  120
LDACEVDYLY VGEESMNDEQ NSDPENEKSV EHVEQQSRKR KMEEVAEMDE PNSDNNFNLS  180
VVLKKMGIYV TPRYRRFSAE ESKRAISFAR IVQPKNSSFM VILEQHFKSC RDVYCPIKFA  240
AKFVKKDSKY VKVQISNEVK ESIELQWKPK GGFFLTRGWA KISRVKNLKE GDICIFELIR  300
KQDLLFKLSV FHMSFTSAVD TLPFAMKVKH NEEDPAQNLL EVFYFVLIKQ YNRIYKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	162	SRKRKM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	7e-49	B3 family protein