PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57062.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 375aa    MW: 41158.2 Da    PI: 4.5074
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.21.5e-15207243135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  GAY57062.1 207 CQHCGISEklTPAMRRGPAGPRTLCNACGLMWANKGT 243
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MFAMNPQPLQ ARPYIDTEEH DVAQTPIPIQ NGSKQGDRYD EPEEVEDEAG ASSVNRKSND  60
RGGSSVQSST STRTSELTVA YEGEVYVFPA VTPHKVQALL LLLGECDIPS TVPSSAFAQP  120
QNIMSGGSAS NGSKLSQRIA SLVRFREKRK ERSFEKKIRY SCRKEVAQRM QRKNGQFTSS  180
KATFNIASAN SNPSNGSAPP ESVSRICQHC GISEKLTPAM RRGPAGPRTL CNACGLMWAN  240
KGTLRDLTKG ARNICFEQHE LETSSDIKPA TTEAENSYAN QDEQGSPHET KPAPLDPQNH  300
SMRSNEQYLL ESDDGFACPL PIQEDNSLMN LDDEDLQEAM DELANASGSD FEIPSNFDEQ  360
VDVDDSNLGT DWLDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.17e-50GATA family protein