PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY57081.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 144aa    MW: 15997.8 Da    PI: 6.0115
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY57081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.31.1e-07601411190
        FAR1  11 GFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 G  ++++ks     +g+  + tf C ++g  +++  +  t k+ +t+ ++++gC   lk +k + d+ w ++ +   HnH+++
  GAY57081.1  60 GLVIVIKKSDVG-GDGRRPRITFACERSGAYRRKFAEgqTPKRPKTTGTKKCGCPFLLKGHKLDtDDDWILKVVCGVHNHPVT 141
                 555666655554.66778899********998887775456666788889999999999887778***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MEEQVLSEGA DHEDDESSTC GSTVGNEDDV DFGSAFTTDM VFNSREELVE WIRDTGKRNG  60
LVIVIKKSDV GGDGRRPRIT FACERSGAYR RKFAEGQTPK RPKTTGTKKC GCPFLLKGHK  120
LDTDDDWILK VVCGVHNHPV TQHV