PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57124.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 494aa MW: 54978.8 Da PI: 7.853

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	72	116	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+++++da k++G g W+ I +++g ++t+ q++s+ qk+ GAY57124.1 72 REKWTEEEHQRFLDALKMYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 116 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
METIFELNKL FKSDVAVAPP PPQLRYTQEI FQETQRNHRL AVYTVAMSNS LYSFENDSLP 60 KVRKPYTITK QREKWTEEEH QRFLDALKMY GRGWRQIEEH VGTKTAVQIR SHAQKFFSKV 120 VRESNGSSES SIMAIEIPPP RPKRKPVHPY PRKSVDSLKA TSVSNQQENF TSSNALVSDK 180 DRQSPTSVVS AFNSDTLGCA ASDQQNGCSS PTSCTTEMHS VNLLPIEKEN EYVTSISFPK 240 EEKISTLPAH LSASSNVEEL VSVSKDSVCP KGDAAAAPSC TSIKLFGRTV LVTDSWKPYS 300 LGADSYKSPI SKSSQENLDV DKENFVQSAP SKHLDTHLLL GMVSSNCNPS SHIGPVFQNM 360 ELQKKRTNVA EASPNIYLPW YSLYRGVPYF HLMPIGENQA ATPLEFSVKD KEILNERSCS 420 GSSAGSVSEL ENREKSSDVA VDSQCPQVCP LSQASPSNCM RGFVPYKRCL AESEIRSSVI 480 VSEERERKRA RVCS

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

METIFELNKL FKSDVAVAPP PPQLRYTQEI FQETQRNHRL AVYTVAMSNS LYSFENDSLP  60
KVRKPYTITK QREKWTEEEH QRFLDALKMY GRGWRQIEEH VGTKTAVQIR SHAQKFFSKV  120
VRESNGSSES SIMAIEIPPP RPKRKPVHPY PRKSVDSLKA TSVSNQQENF TSSNALVSDK  180
DRQSPTSVVS AFNSDTLGCA ASDQQNGCSS PTSCTTEMHS VNLLPIEKEN EYVTSISFPK  240
EEKISTLPAH LSASSNVEEL VSVSKDSVCP KGDAAAAPSC TSIKLFGRTV LVTDSWKPYS  300
LGADSYKSPI SKSSQENLDV DKENFVQSAP SKHLDTHLLL GMVSSNCNPS SHIGPVFQNM  360
ELQKKRTNVA EASPNIYLPW YSLYRGVPYF HLMPIGENQA ATPLEFSVKD KEILNERSCS  420
GSSAGSVSEL ENREKSSDVA VDSQCPQVCP LSQASPSNCM RGFVPYKRCL AESEIRSSVI  480
VSEERERKRA RVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	2e-49	MYB_related family protein