PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY57125.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB_related

Protein Properties

Length: 448aa MW: 49605.7 Da PI: 7.8477

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY57125.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	26	70	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE+++++da k++G g W+ I +++g ++t+ q++s+ qk+ GAY57125.1 26 REKWTEEEHQRFLDALKMYGRG-WRQIEEHVG-TKTAVQIRSHAQKF 70 789*****************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MSNSLYSFEN DSLPKVRKPY TITKQREKWT EEEHQRFLDA LKMYGRGWRQ IEEHVGTKTA 60 VQIRSHAQKF FSKVVRESNG SSESSIMAIE IPPPRPKRKP VHPYPRKSVD SLKATSVSNQ 120 QENFTSSNAL VSDKDRQSPT SVVSAFNSDT LGCAASDQQN GCSSPTSCTT EMHSVNLLPI 180 EKENEYVTSI SFPKEEKIST LPAHLSASSN VEELVSVSKD SVCPKGDAAA APSCTSIKLF 240 GRTVLVTDSW KPYSLGADSY KSPISKSSQE NLDVDKENFV QSAPSKHLDT HLLLGMVSSN 300 CNPSSHIGPV FQNMELQKKR TNVAEASPNI YLPWYSLYRG VPYFHLMPIG ENQAATPLEF 360 SVKDKEILNE RSCSGSSAGS VSELENREKS SDVAVDSQCP QVCPLSQASP SNCMRGFVPY 420 KRCLAESEIR SSVIVSEERE RKRARVCS

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MSNSLYSFEN DSLPKVRKPY TITKQREKWT EEEHQRFLDA LKMYGRGWRQ IEEHVGTKTA  60
VQIRSHAQKF FSKVVRESNG SSESSIMAIE IPPPRPKRKP VHPYPRKSVD SLKATSVSNQ  120
QENFTSSNAL VSDKDRQSPT SVVSAFNSDT LGCAASDQQN GCSSPTSCTT EMHSVNLLPI  180
EKENEYVTSI SFPKEEKIST LPAHLSASSN VEELVSVSKD SVCPKGDAAA APSCTSIKLF  240
GRTVLVTDSW KPYSLGADSY KSPISKSSQE NLDVDKENFV QSAPSKHLDT HLLLGMVSSN  300
CNPSSHIGPV FQNMELQKKR TNVAEASPNI YLPWYSLYRG VPYFHLMPIG ENQAATPLEF  360
SVKDKEILNE RSCSGSSAGS VSELENREKS SDVAVDSQCP QVCPLSQASP SNCMRGFVPY  420
KRCLAESEIR SSVIVSEERE RKRARVCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18330.1	5e-50	MYB_related family protein